Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30248g00001 ATGGCTTTGGAAGGATCTCTCTTTTTCGGCATTTACTCCCAGACAAAACAGTACCTTCAGGGTGGCGTGCAAAGCGGTGCGCCGCGACCTCAAGTGGTAATACCGTCTGCAGCTTTTAGTGGTGCCATCAATAGTTTTGTGTTAGGTCCAACAGAACTGATAAAGTGTAGGATGCAGATCCAAGGCACCGACTCTTTAGTTCCCGTGTCAAGTAGATACAGTAGTCCCCTTGATTGTGCCCTGAAAACTTTAAAAACTGAAGGGGTGAAAGGAGTATTTCGTGGAAGTGGTACAACATTGCTTAGAGAATCTATAGGGAATGCTACATTTTTCAGTGTATACGAATATATGCGTTATCGAATGCATTCATATATCAAACCTGCTTCATCCGATTACAGCCACCTGATTGAAATTGGAATTGGAGTTGTTACCGGTGGAGTTAGTGGTGTAGCC 453 0.4393 MALEGSLFFGIYSQTKQYLQGGVQSGAPRPQVVIPSAAFSGAINSFVLGPTELIKCRMQIQGTDSLVPVSSRYSSPLDCALKTLKTEGVKGVFRGSGTTLLRESIGNATFFSVYEYMRYRMHSYIKPASSDYSHLIEIGIGVVTGGVSGVA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30248g00001 151 SUPERFAMILY Mitochondrial carrier 3 149 IPR023395 -
Trme30248g00001 151 Gene3D Mitochondrial carrier domain 1 151 IPR023395 -
Trme30248g00001 151 Pfam Mitochondrial carrier protein 36 119 IPR018108 -
Trme30248g00001 151 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 120 IPR018108 -
Trme30248g00001 151 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30248g00001 Trme-Chr30248 16 787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30248g00001 40 151 Antiporters AT1G79900 33.036 5.97e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30248g00001 K15109 - gmx:100815087 231.106