Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3020g00001 ATGGATAATGCTTTACGAGCATGCTGCAAAGGTCATAGAGAAGGTGACAATGGTCAGCAGCATCTAATATATGAGAAGTTGCCAAATGATATCTCAGATGGGCATGCGTTACTGCTGGATCCTATCTTAAGGCACCTCAAGGTGTGCATGACATCCGAGATTGACATTGGTCTGAATGAAGATTTCCGTGTCACTCCTGGGATATGCGAGTTTGGGGACCAGTACTTTGGAAAAGATGATGATGACGAGCAGTTGGAGGGTTGTTCTTGGTAG 273 0.4505 MDNALRACCKGHREGDNGQQHLIYEKLPNDISDGHALLLDPILRHLKVCMTSEIDIGLNEDFRVTPGICEFGDQYFGKDDDDEQLEGCSW 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3020g00001 90 SUPERFAMILY PRTase-like 12 77 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3020g00001 Trme-Chr3020 1038 2259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3020g00001 1 81 PRT Gene Family AT4G26510 48.855 1.33e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3020g00001 K00876 - qsa:O6P43_013499 112.464