Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30190g00001 TTTGAGCAATTCTGCATCAATTTTGCAAACGAAAAGCTTCAACAACATTTTAATGAGCATGTATTCAAGATGGAGCAAGAGGAGTATAAAAAAGAAGAAATTGAATGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAGCCCATTGGTATCATTGCCCTGTTAGATGAAGCATGCATGTTTCCAAAATCGACGCACCAAACATTCTCAACCAAGTTGTTTCAGCACTTCTTGTCCCACACTAGGTTTGGAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACATACCATACAAACACATTTTTAGACAAAAATCGTGATTATGTAGTTCTAGAGCATTGTAATGTATTATCTTCTTCAAAATGCCCCTTTGTGAAGGGTCTTTTTCCTTCTTTACCAGAGGAATCTTCAAGGTCATCCTACAAGTTTTCTTCCGTGGCTTCCAGATTTAAGGTGTTCATATCTATTACCTTTTGCGTGTTATTGAATTTAAGGTGA 543 0.3536 FEQFCINFANEKLQQHFNEHVFKMEQEEYKKEEIEWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHQTFSTKLFQHFLSHTRFGKEKFSETDFTVSHYAGKVTYHTNTFLDKNRDYVVLEHCNVLSSSKCPFVKGLFPSLPEESSRSSYKFSSVASRFKVFISITFCVLLNLR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30190g00001 180 Gene3D - 1 170 - -
Trme30190g00001 180 ProSiteProfiles Myosin motor domain profile. 1 180 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme30190g00001 180 Pfam Myosin head (motor domain) 1 153 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme30190g00001 180 PANTHER MYOSIN 1 166 - -
Trme30190g00001 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 166 IPR027417 -
Trme30190g00001 180 SMART MYSc_2a 1 180 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30190g00001 Trme-Chr30190 67 1164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30190g00001 1 166 Myosins gene family AT4G33200 83.133 4.07e-89 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30190g00001 K10357 - gmx:100790815 299.671