Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3018g00002 ACTCAGAACTTTGTCTGCAAGTTACTGGATCGGAATCATGGCGCTGTCTGGACTACTACATCTCCACCAAGTGGACCTTTGTCTTTAAGGATGTTGTTTAGTACTGAAGATGGAGACGATACATGGGTCGTTCCAGTTAATAACATACCAGAAGACTGGAAGGCTGGAGAAACATATGACTCAGGAGTACAAGTAGACCAGTAG 204 0.4412 TQNFVCKLLDRNHGAVWTTTSPPSGPLSLRMLFSTEDGDDTWVVPVNNIPEDWKAGETYDSGVQVDQ 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3018g00002 67 Gene3D - 1 65 IPR036749 -
Trme3018g00002 67 PANTHER EXPANSIN-B3 5 64 - -
Trme3018g00002 67 SUPERFAMILY PHL pollen allergen 8 61 IPR036749 -
Trme3018g00002 67 Pfam Expansin C-terminal domain 9 49 IPR007117 -
Trme3018g00002 67 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 9 61 IPR007117 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3018g00002 9 65 Expansin Gene Family AT4G38400 41.379 4.00e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3018g00002 - - rcu:8263701 132.494