Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme3018g00002 | ACTCAGAACTTTGTCTGCAAGTTACTGGATCGGAATCATGGCGCTGTCTGGACTACTACATCTCCACCAAGTGGACCTTTGTCTTTAAGGATGTTGTTTAGTACTGAAGATGGAGACGATACATGGGTCGTTCCAGTTAATAACATACCAGAAGACTGGAAGGCTGGAGAAACATATGACTCAGGAGTACAAGTAGACCAGTAG | 204 | 0.4412 | TQNFVCKLLDRNHGAVWTTTSPPSGPLSLRMLFSTEDGDDTWVVPVNNIPEDWKAGETYDSGVQVDQ | 67 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme3018g00002 | 67 | Gene3D | - | 1 | 65 | IPR036749 | - | |
Trme3018g00002 | 67 | PANTHER | EXPANSIN-B3 | 5 | 64 | - | - | |
Trme3018g00002 | 67 | SUPERFAMILY | PHL pollen allergen | 8 | 61 | IPR036749 | - | |
Trme3018g00002 | 67 | Pfam | Expansin C-terminal domain | 9 | 49 | IPR007117 | - | |
Trme3018g00002 | 67 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 9 | 61 | IPR007117 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme3018g00002 | 9 | 65 | Expansin Gene Family | AT4G38400 | 41.379 | 4.00e-10 | 51.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme3018g00002 | - | - | rcu:8263701 | 132.494 |