Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme301849g00001 TGTGGTGAAACTTTTGACACTAAGAAAGGTCTTGAAGATCACATGAAGACTCACAATGGACCATTCAAGTGCTTCAAATGCAACAGGATTTACTCAACAAGGATTGGCAGATTGGAGCACATGAAAAATGGTCATTGCAGCAAGAAATGA 150 0.3933 CGETFDTKKGLEDHMKTHNGPFKCFKCNRIYSTRIGRLEHMKNGHCSKK 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme301849g00001 49 Gene3D Classic Zinc Finger 1 46 - -
Trme301849g00001 49 SUPERFAMILY beta-beta-alpha zinc fingers 1 33 IPR036236 -
Trme301849g00001 49 ProSiteProfiles Zinc finger C2H2 type domain profile. 1 23 IPR013087 -
Trme301849g00001 49 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Trme301849g00001 49 ProSitePatterns Zinc finger C2H2 type domain signature. 24 45 IPR013087 -
Trme301849g00001 49 Pfam C2H2-type zinc finger 1 18 - -
Trme301849g00001 49 SMART c2h2final6 1 18 IPR013087 -
Trme301849g00001 49 SMART c2h2final6 22 45 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trme301849g00001 zf-C2H2_4 0.00096 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme301849g00001 K09228 - mbez:129559290 50.0618