Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme301279g00001 ATGGAGAAAAATGAGCTGAAGGAGGAAAATGGTAGTCTAGAAACTCAAATTGAGAAGCTTCAAGGAGAGATACAGGCAAAAATGGCTCAATCCAAACCTGACCTGAATGTACCTCCTCAATCGGAGCTTGAGCAGCCAGAACTGACAAAATTTCCAGGACATGGTTTCCAAATGCCTACCATAGAACCTACATTGCAGCAAGGACCTGCTGTTTTGGTTGTCCCTTTTCGTCCTGATCTTCAAGCTGCTTTTCCAGCTCCTAAT 264 0.4394 MEKNELKEENGSLETQIEKLQGEIQAKMAQSKPDLNVPPQSELEQPELTKFPGHGFQMPTIEPTLQQGPAVLVVPFRPDLQAAFPAPN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme301279g00001 88 Coils Coil 3 30 - -
Trme301279g00001 88 PANTHER TRANSCRIPTION FACTOR BHLH47 1 85 - -
Trme301279g00001 88 MobiDBLite consensus disorder prediction 26 57 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme301279g00001 2 79 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 46.739 4.22e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme301279g00001 - - psat:127073805 154.066