Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3008g00001 ATGGGAAGAGAAATCATTCGTGAGAAATCACCGGAGGAACTTGAGGGGCGTTGCAGGTTATGGTTTCATGAGGATGTGCTTGATTTATTATCAGAAAAAACTGGAACAAAAGCTATTAAGGGGCTAGCTTTGAAGTTGGCAACAGCTAATGCAAAATGTTTTAGTACTAAAGCATTTGAGAATATGAAGAGACTCAGATTGCTTCAACTTGCTGGAGTAAAACTTGATGGAGATTTTGGATATCTTTCAAGAAATCTGAGATGGCTGTCTTGGAATGGATTTTCTTCAACACATATACCTACAAATTTTTATAGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCAATGTGAAATTTGTGTGGAAAGATATCCAGATGATGGTGAATCTAAAAATTCTCAATCTAAGTCATTCTCATTGTCTGACACACAGCCCAGACTTTTCATACATGCCGAATCTTGAAAAACTAGTACTTGCCGATTGTCCAAGATTGTCTGAGATTGAAAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTCTTCTTGCAAATAACACTGCAATAAAGAAATCTTGGATGTCGCCTACAACTGGTTTTCCATCCATGTGTCAAACATCTACTATCATGTCATCACTTGTTCCTTTAGATATACCACATGGTAGTTCCCACGAAATATCATCGATTTCCAAGTACCTGCCATGTCTTCGAAGTCTTTGGGTGGAGTGTAGCTCAGAACTTCAACTTTCTCATGATGCAGAAATAATTTTGGATGCCTTGTATGCCACTATTAATAAGGAATTGGAGTCAGCTGCATCTACATCACAAGTATCAGGAAATTCCTTGAAATCGATTTTCATTCAATTGGGAATGAATTGTCACGTTGCCAATATTTTGAAAGAAAAAATTGTACAGAATATGACTGTCGATGGATATGGTGGTGTTTTGCTCCCCAGTGATAGCTATCCATATTGGTTAACCTTCAATTGCAAAGGTTCTTCTGTAATTTTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTAAAGACAATAATGTGCATTGTCTTTTCTTCAACTGCCGAAAACATAGCATCAGATGGTCTTAAAAACATGATGGTGAAAAATTTCACAAAGGCCACCATTCAGCTTTATAAGAGAGAGGCATTAGTCTCATTTGAAGATGAGGAGGGGCAGAGATTAGTATCGAGTATAGAACCTGGTAATAAAATAGAGGTTGTTGTTGTTTTTGAGAACAATTTCATTGTGAAGAAAACAGCAATATATCTCATATATGATGAACCAATTGACGAAACCATGGAGCAAAGTGATGCACCACTAGATAAGAATGTCATTTTTTGTAGTGATGGTGAAGATGAATGTGCGTTGGTGGATTGA 1398 0.3698 MGREIIREKSPEELEGRCRLWFHEDVLDLLSEKTGTKAIKGLALKLATANAKCFSTKAFENMKRLRLLQLAGVKLDGDFGYLSRNLRWLSWNGFSSTHIPTNFYRENLVSIELENSNVKFVWKDIQMMVNLKILNLSHSHCLTHSPDFSYMPNLEKLVLADCPRLSEIEKLEEDLEQMESLTTLLANNTAIKKSWMSPTTGFPSMCQTSTIMSSLVPLDIPHGSSHEISSISKYLPCLRSLWVECSSELQLSHDAEIILDALYATINKELESAASTSQVSGNSLKSIFIQLGMNCHVANILKEKIVQNMTVDGYGGVLLPSDSYPYWLTFNCKGSSVIFEVPQVEGRNLKTIMCIVFSSTAENIASDGLKNMMVKNFTKATIQLYKREALVSFEDEEGQRLVSSIEPGNKIEVVVVFENNFIVKKTAIYLIYDEPIDETMEQSDAPLDKNVIFCSDGEDECALVD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3008g00001 465 Gene3D Ribonuclease Inhibitor 30 295 IPR032675 -
Trme3008g00001 465 SUPERFAMILY L domain-like 44 260 - -
Trme3008g00001 465 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 271 IPR044974 GO:0006952
Trme3008g00001 465 Coils Coil 168 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3008g00001 Trme-Chr3008 183 2394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3008g00001 2 162 WRKY Transcription Factor Family AT4G12020 32.768 2.67e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3008g00001 - - cam:101494533 638.262