Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30082g00001 ATGTTTGAAGAATGTGTTGCTCCACTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTCCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGAACTGGCTTTAAAGAAGGTTTCCAAGCAGGAATAATACCCCAAGTTATGAATGTTTTGTTCAGCAAAATTGGGACCTTAAAGGACCAGATTGAATTTCAATTGCATGTTTCCTTTATCGAGATTAAGTATCTGACAACAACATTTAATTGTGAAAAGATTCTTAAAGAAGAAGTAAGAGATTTACTGGATTCCTCCTCAATGAGCAAACCAGAAACTGCAAATGGACATGCAGGAAAAATGGCCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTTATAACCCTTGCAGGATCTACTGAAGTCGGTGTCACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAGGGATCCTTGAGTAGAGCAACAGGGAGCACAAATATGAACAATCAATCCAG 518 0.3996 MFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGFQAGIIPQVMNVLFSKIGTLKDQIEFQLHVSFIEIKYLTTTFNCEKILKEEVRDLLDSSSMSKPETANGHAGKMASPGKPPIQIRETSNGVITLAGSTEVGVTTLKEMAACLEQGSLSRATGSTNMNNQS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30082g00001 172 ProSiteProfiles Kinesin motor domain profile. 1 172 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme30082g00001 172 SMART kinesin_4 1 171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme30082g00001 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 172 IPR027417 -
Trme30082g00001 172 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 172 IPR027640 GO:0003777|GO:0007018
Trme30082g00001 172 MobiDBLite consensus disorder prediction 101 129 - -
Trme30082g00001 172 PRINTS Kinesin heavy chain signature 16 37 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme30082g00001 172 PRINTS Kinesin heavy chain signature 166 172 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme30082g00001 172 Gene3D Kinesin motor domain 1 172 IPR036961 -
Trme30082g00001 172 Pfam Kinesin motor domain 1 172 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30082g00001 Trme-Chr30082 418 1127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30082g00001 9 172 Calmodulin-binding Proteins AT5G65930 27.439 6.67e-13 63.9