Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme300739g00001 ATGAGTAAGCTTCAGAGTGATGCTGTGAGAGAAGCAATTACAGGAATCATGGGTGCTTCAAAGGACAAAGGCCGTAATTTTGTGGAGACTATTGAACTCCAGATTGGTCTAAAAAACTATGATCCTCAAAAGGATAAGCGTTTCAGTGGTTCTGTTAAATTGCCTCATATCCCTCGACCCAAGATGAAAATTTGCATGCTTGGTGATGCCCAACATGTTGA 221 0.4118 MSKLQSDAVREAITGIMGASKDKGRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme300739g00001 73 FunFam Ribosomal protein 22 64 - -
Trme300739g00001 73 SUPERFAMILY Ribosomal protein L1 1 72 IPR023674 -
Trme300739g00001 73 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme300739g00001 Trme-Chr300739 1 291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme300739g00001 1 73 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 89.041 3.00e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme300739g00001 K02865 - nnu:104605335 137.502