Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30062g00001 ATGGCTGCAAATGAAGCTATATGCCAAGGATCAAAAGGTAAAAGCTCAATACACATAATTGATTTAGGAATGGAGCATACTCTTCAATGGCCTTCCCTTATAAGGAACCTCGCTTCGAGGCCCGAGGGGCCTCCAAGGCTAAGGATAACAGGATTCAGTACGAACGAAGAAAACAATGTGAAACTTCACACTAGCATGAATTTTCTTGTGGAGGAAGCAATCTCATTAGGAATAGTCCTTGAATTTCGCATAATATTAGAGCCGGCAACACCTTCTTTTCTTACAATTGAGAACCTCAACTTGAGAGAAGGTGAATCTTTATTTGTTAATAGCATCTTAAAATTGCACAATTATGTGAAAGAAAGTAGAGGTTACCTAAAGTCAATTCTTCAATCAATCAAGAAGCTAAGTCCAATTGCAGTGACAGTTGTAGAGCAAGACACAAACCACAATGGACCTTTCTTTCTAGGGAGGTTTTTGGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAAGCATGTATGCCAAGAAATAGTCCTATTAGGATGAAAATAGAGAGAGCACATTTTGCAGAAGAAATTTGTAACATTGTTGCTTATGAAGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCATGTAATGCCACTGAAGTGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGAGGGATATACATTGTCATGTGAAAAGGGCTGTCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTCTCATAA 840 0.3833 MAANEAICQGSKGKSSIHIIDLGMEHTLQWPSLIRNLASRPEGPPRLRITGFSTNEENNVKLHTSMNFLVEEAISLGIVLEFRIILEPATPSFLTIENLNLREGESLFVNSILKLHNYVKESRGYLKSILQSIKKLSPIAVTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSPIRMKIERAHFAEEICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLKCTSQARMMLSVYDCEGYTLSCEKGCLLLGWKGRPIMMASAWQVASFS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30062g00001 279 ProSiteProfiles GRAS family profile. 1 274 IPR005202 -
Trme30062g00001 279 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 273 IPR005202 -
Trme30062g00001 279 Pfam GRAS domain family 1 274 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30062g00001 Trme-Chr30062 89 928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30062g00001 3 277 GRAS Transcription Factor Family AT1G14920 39.502 2.34e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme30062g00001 GRAS 6.3e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30062g00001 - - mtr:25502341 521.161