Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme30041g00001 GTAAGGGATGAACTAGAAAACTTGTTAGATGATGATGGAGATATGGCTGAGCTATATCTGACTGACAAGTTGGCTCAACAGAAGTTTGAAATTTTTTCTGCTGCTTCATCCATCAATAATAATGGGGATGACATGACGGCGAATCAAGTTCTTCAACAAGATATAGTYGACAGGACTCATCCTGAAATATCAATTGAACAAGGTGAAGATTTAATTGATCATGAAGATTATGAAAATGTTGGTGGTGAAATCTCTGGAACCCAAGCTGCTACTGTCTATAGTAGTGTACCAAATGTTCAGGAGCTTGAGATGCTCTTAGGAGCATACTTTGTGCAAATTGGAGCCACATTGAACAAATTATCCGCGCTAGGTGAATATGTCGAGGACACAGAGGACTACATAAACATAACATTGGATGATAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGCACTGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCACATTGACATATTTGATGCTAAAGGGAATTCAGCATTCTTTGAGACAGTTTTTGGATGCACTGCTACTTGCATAATCTTATACTTCCTTGCCATGTTTTGGTACAAGAAAAGGCGCATACTGTAA 645 0.3798 VRDELENLLDDDGDMAELYLTDKLAQQKFEIFSAASSINNNGDDMTANQVLQQDIVDRTHPEISIEQGEDLIDHEDYENVGGEISGTQAATVYSSVPNVQELEMLLGAYFVQIGATLNKLSALGEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDIFDAKGNSAFFETVFGCTATCIILYFLAMFWYKKRRIL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme30041g00001 214 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 213 IPR039204 -
Trme30041g00001 214 Gene3D Magnesium transport protein CorA, transmembrane region 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme30041g00001 Trme-Chr30041 283 1152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme30041g00001 1 214 MRS2 Gene Family AT3G19640 48.035 5.18e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme30041g00001 - - lja:Lj0g3v0356029.1 218.779