Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29982g00001 GGAGGAACCATTTCCGACATGACAGTGTTGGAAAGACAAAGAGCAAGAATCAAGTTTCAAAATGAACACGAACAATTTTCTGGAAATGGTTTCTCTTCTTCACACCAACAACAATTTATGATGCTTGACCCGGATTATGAAAACGGGTTTGAAGAAGAAACCGTTAAGAAAAGGAAAACTGATAATAAGGTTGATTTGAATTCTAAAGACAAGAGGATCAAAGTGTGTGTAGAAGAAGGAGATTCCAAAATCATAGAGCAAAGAAAAGGACAGAAGAATACAAAGTTCAACAATGGAAACAAAAATAAGAGAGAAAATTGTGAAGATAATAATAATTCGAAGGAAAATTCGAAAGGGTCTGAGGTTCAAAATCAGAAGCCGGATTACATTCATGTTCGTGCACGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCTGAAAGAGTGAGTAAAATTTAA 459 0.3595 GGTISDMTVLERQRARIKFQNEHEQFSGNGFSSSHQQQFMMLDPDYENGFEEETVKKRKTDNKVDLNSKDKRIKVCVEEGDSKIIEQRKGQKNTKFNNGNKNKRENCEDNNNSKENSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVSKI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29982g00001 152 MobiDBLite consensus disorder prediction 87 128 - -
Trme29982g00001 152 MobiDBLite consensus disorder prediction 98 115 - -
Trme29982g00001 152 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 27 149 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29982g00001 Trme-Chr29982 1 459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29982g00001 4 149 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 36.464 6.68e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29982g00001 - - gmx:100794256 110.538