Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29947g00001 GTTGCTTTGGGTTCTGCAACTCAAATTGGAATGTTTGTGGTTCCTTTATGTGTAATTGTTGCTTGGATTCTTGGTATTAAAATGGACCTAAATTTCCACCTCCTAGAAACTGGTTCTCTTGCTTTGGCAATAATAACCACAGGCTTCACATTACAGGATGGAACTTCTCACTACTTGAAAGGCCTTATTCTCTTGCTCTTATACATTGTTATTGGGGCATGCTTTTTTGTACAGAGAACACCCTCCGGTGAGCATAATATAGAACCGCAGTCAATTGCAGCCGATGCAGCCTCAATCGCTGGCGCTGCACATTACATTGTGGCTCAGATTGCTGTCTCAGACCTTTATTTAAAACCTTGGTTGCCATTGCTTTGA 375 0.4187 VALGSATQIGMFVVPLCVIVAWILGIKMDLNFHLLETGSLALAIITTGFTLQDGTSHYLKGLILLLLYIVIGACFFVQRTPSGEHNIEPQSIAADAASIAGAAHYIVAQIAVSDLYLKPWLPLL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29947g00001 124 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 81 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29947g00001 Trme-Chr29947 3 830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29947g00001 1 84 Antiporters AT2G38170 71.429 1.00e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29947g00001 K07300 - gmx:100816231 140.969