Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29915g00001 CCGAAGTTGAATGCTGCAGTACTGGAAATGTTTCGTAATGAATATATTGGAACTGCCCCATATGTATCTTGCTTCCCTTCAGTACGTCACCATAGATTATGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCAGAAGGAGATCCCGCCCAACATTTAATAGAAGAACTGCTTGTCCGTGCAGCCAAGAAAGCTG 265 0.4226 PKLNAAVLEMFRNEYIGTAPYVSCFPSVRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLVRAAKKA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29915g00001 88 Gene3D - 1 88 IPR036457 -
Trme29915g00001 88 Pfam Protein phosphatase 2C 18 80 IPR001932 -
Trme29915g00001 88 SUPERFAMILY PP2C-like 16 78 IPR036457 -
Trme29915g00001 88 PANTHER PROTEIN PHOSPHATASE 2C 16 84 IPR015655 GO:0004722|GO:0006470
Trme29915g00001 88 ProSiteProfiles PPM-type phosphatase domain profile. 1 88 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29915g00001 Trme-Chr29915 492 756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29915g00001 1 88 PP2C-type Phosphatase Gene Family AT2G35350 75.000 6.39e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29915g00001 - - mtr:11415473 174.866