Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme298880g00001 ACCGAGGAGTTAACAGATACTTTGGCACCTGAGGTGGCATATTTCTCATCAAGGGGACCAAGCAACATTACACTTGAGATTCTCAAGCCGGATGTAATTGCTCCTGGAGTTGACATTCTTGCTAGTTGGTCTCCAGTTGCACTTTCTAATACTTCCGGTGAGAACATACCATTAGTATTCAACATTGAGTCAGGTACATCGATGGCATGTCCGCATGTATCTGGTGCGGCGGGATATATCAAATCTTTCCGGCCTACATGG 261 0.4559 TEELTDTLAPEVAYFSSRGPSNITLEILKPDVIAPGVDILASWSPVALSNTSGENIPLVFNIESGTSMACPHVSGAAGYIKSFRPTW 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme298880g00001 87 Pfam Subtilase family 10 87 IPR000209 GO:0006508|GO:0008236
Trme298880g00001 87 ProSiteProfiles Serine proteases, subtilase domain profile. 1 87 - -
Trme298880g00001 87 ProSitePatterns Serine proteases, subtilase family, serine active site. 65 75 IPR023828 -
Trme298880g00001 87 Gene3D Peptidase S8/S53 domain 6 87 IPR036852 GO:0004252|GO:0006508
Trme298880g00001 87 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 87 IPR045051 -
Trme298880g00001 87 SUPERFAMILY Subtilisin-like 9 86 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme298880g00001 Trme-Chr298880 3 347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme298880g00001 1 87 Subtilisin-like Serine Gene Family AT5G58830 53.409 5.97e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme298880g00001 - - cam:101490875 133.265