Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme298637g00001 AAGGAAAACAGAGAGAAATTGGGGCATGAAGCGGCAGAGGAGGTGTCGTTCGAGCATTTCCCTGCGGAGAGTTCACCTGATGATGTAACCAATGAAGAGAGTACGACATCAACGCCTGCAAGGGACGATAGGAATCATGCCATTGCCGTTGCAGAAGCTACTGCAGCAGCTGCTGAAGCTGCCGTGGTAGCTGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCTGGTTATGGACGCCAATCTAAAGAAGAAAGAGCAGCAACATTCATTCAATCACACTATAGAGGATACCT 293 0.4915 KENREKLGHEAAEEVSFEHFPAESSPDDVTNEESTTSTPARDDRNHAIAVAEATAAAAEAAVVAAQAAARVVRLAGYGRQSKEERAATFIQSHYRGYL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme298637g00001 98 MobiDBLite consensus disorder prediction 1 21 - -
Trme298637g00001 98 MobiDBLite consensus disorder prediction 1 45 - -
Trme298637g00001 98 PANTHER IQ-DOMAIN 5-RELATED 14 98 - -
Trme298637g00001 98 ProSiteProfiles IQ motif profile. 83 98 IPR000048 GO:0005515
Trme298637g00001 98 Pfam IQ calmodulin-binding motif 84 98 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme298637g00001 Trme-Chr298637 1 293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme298637g00001 9 98 IQD Protein Family AT3G49260 70.652 1.23e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme298637g00001 - - zju:107414775 122.094