Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29807g00001 ATGCCGGTGGAGAAGGTTAGAGAAAGTTTCGTGAAATTCAACGCTGCGTTTGCTGAAGAGTGTAGGAAACAGTCGTCGTGGGTTGTAACCGACCCGAAACTGCGAGATGAAATCAAAGGCGCGATAGGTTCAAAGTTGTTGGCGAAGTATGGTGGGTTTTATGAGATGAACCGGGTCGGGTTGGAGTCGGTTATTAGATATGAACCGGAAAATGTAGAGGGTTATTTGTGTAATATTTTGTATGGGGTTGGAGATTCGGGTAGTGTATCGTCACATTCTTCTTCATCGGCAGCGTCGTCTTCTCGTGGCAATAGTCGCCGGTGA 324 0.4691 MPVEKVRESFVKFNAAFAEECRKQSSWVVTDPKLRDEIKGAIGSKLLAKYGGFYEMNRVGLESVIRYEPENVEGYLCNILYGVGDSGSVSSHSSSSAASSSRGNSRR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29807g00001 107 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 76 IPR004140 GO:0000145|GO:0006887
Trme29807g00001 107 Pfam Exo70 exocyst complex subunit 4 76 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme29807g00001 107 SUPERFAMILY Cullin repeat-like 5 77 IPR016159 -
Trme29807g00001 107 MobiDBLite consensus disorder prediction 87 107 - -
Trme29807g00001 107 Gene3D Exocyst complex component Exo70 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29807g00001 Trme-Chr29807 833 1156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29807g00001 8 90 EXO70 exocyst subunit family AT1G07725 43.373 5.53e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29807g00001 K07195 - jre:109015471 101.293