Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29801g00001 TTGGATACACTGAGTGAGGAGTCTTACAAAGACAGCACATTGATTATGCAACTTCTAAGGGACAACCTCACATTGTGGACTTCTGACATCCCTGAAGATGGAGATGAAGAACAGAAGGTGGAACCTTCGCGAGGTGGTGGAGATGTTATCTTGACAAAAGTTACGTTTTGCAGTGAAGAGAAGCTGATAGGAACTTGTGGTGTGCATATGAGAAGGCTACTCTCTTGA 228 0.4386 MDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDEEQKVEPSRGGGDVILTKVTFCSEEKLIGTCGVHMRRLLS 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29801g00001 75 ProSitePatterns 14-3-3 proteins signature 2. 9 28 IPR023409 -
Trme29801g00001 75 Pfam 14-3-3 protein 1 27 IPR023410 -
Trme29801g00001 75 Gene3D - 1 43 IPR036815 -
Trme29801g00001 75 SUPERFAMILY 14-3-3 protein 1 34 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29801g00001 Trme-Chr29801 2 657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29801g00001 1 44 14-3-3 family AT1G26480 80.000 3.46e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29801g00001 K06630 - gmx:547891 84.3445