Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme297538g00001 ATGGATTTGTTTAGGAAGTGTATGGAGCCTGTTGAGAAGTGCTTGAGGGATGCTAAGATGGATAAGAACAGTGTCCATGATGTTGTTCTTGTTGGTGGATCTACAAGGATTCCGAAAGTTCAACAACTTTTGCAAGATTTTTTCAATGGCAAGGAGCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAAGCCGCTATTTTGAGTGGTGAAGGTAATGAGAAGGTGCAGGATCTGTTGTTGCTTGATGTTACTCCTCTTTCCCTTGGTTTG 291 0.4364 MDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme297538g00001 97 Pfam Hsp70 protein 2 97 IPR013126 GO:0005524|GO:0140662
Trme297538g00001 97 Gene3D - 55 72 - -
Trme297538g00001 97 FunFam heat shock 70 kDa protein-like 51 76 - -
Trme297538g00001 97 PRINTS 70kDa heat shock protein signature 84 97 - -
Trme297538g00001 97 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme297538g00001 97 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme297538g00001 97 FunFam Heat shock cognate 70 kDa protein 2 7 50 - -
Trme297538g00001 97 Gene3D - 7 54 - -
Trme297538g00001 97 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme297538g00001 97 PANTHER HEAT SHOCK PROTEIN 70KDA 1 97 IPR013126 GO:0005524|GO:0140662
Trme297538g00001 97 SUPERFAMILY Actin-like ATPase domain 2 76 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme297538g00001 Trme-Chr297538 1 291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme297538g00001 1 97 Calmodulin-binding Proteins AT3G12580 98.969 5.77e-63 199