Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2974g00001 ATGAAAATGAAGCAGCTGACGATGGGGAGTGACCCTTGGAAGGCCCATTTGGGCATGGCAGTGGTACAGCTATTCAATGGCGGTTACCATGTTATTACTAAAGTGACCCTTAATGCTGGAGTTAACCAGTTAGTCTTCTGCTTTTATAGGGATCTCCTTGCCCCCTTTATTCTTTCTCCCATCGCTTTCTTCAAAGAAAGACAGACAAGGCCACCCATTACTAAACAGCTACTGATGACATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTACACAAATCCAACTTATGCTACTGCTTTACAACCAGCTATTCCTGTATTTGCCTTTCTGCTTGCTGTGATCATGGGTGTGGAAAGAGTGAACTTGCAGAGTTTTGAAGGTCTAGCAAAGGTCGGAGGAACTATTGTATGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGTGGTCCATTGTTGATAGGATATACAGAACCGGTCATTATACCACAACATGAAATAAGTGTTGGTGATCAGCTACAGCCTTCTGGATGGTTGATTACTGGTTTACAGAATGATTGGAATAGATAA 600 0.415 MKMKQLTMGSDPWKAHLGMAVVQLFNGGYHVITKVTLNAGVNQLVFCFYRDLLAPFILSPIAFFKERQTRPPITKQLLMTFFFLGLTGIFGNQLLFLIGLSYTNPTYATALQPAIPVFAFLLAVIMGVERVNLQSFEGLAKVGGTIVCVSGAILMVLYRGPLLIGYTEPVIIPQHEISVGDQLQPSGWLITGLQNDWNR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2974g00001 199 PANTHER WAT1-RELATED PROTEIN 17 192 IPR030184 GO:0016020|GO:0022857
Trme2974g00001 199 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Trme2974g00001 199 Pfam EamA-like transporter family 16 143 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2974g00001 Trme-Chr2974 464 2263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2974g00001 5 199 Nodulin-like Gene Family AT3G45870 59.487 7.61e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2974g00001 - - psat:127119930 280.796