Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2971g00001 ATGTTTGGAGGAACAGAATCGGTAGCGGCAGCAATAGAATGGGCTATATCGGAGCTAATGAGAAATCCACAAGATCTAAAGCGCGTGCAAGAAGAACTCGCAACCGTGGTTGGCTTAGACCGGCGGGTGGAGGAATCAGACATTGAGAAACTCACTTATCTAAAATGTGTCGTCAAAGAGACATTGCGCCTTCACCCACCGGTTCCCCTTCTCCTCCATGAAACAGCGGAAGACGCGACAATTCGTGGTTATTTTGTCCCAAAGGGCTCGCGCGTGATGATAAATGTGTGGGCTATAGGCAGAGACAAAGACTCGTGGGAAGATCCAGAAGAATTTAAGCCTTCGCGGTTTCTTAATTCAAGCGCGCCCAATTTTAAAGGAAGTAATTTTGAGTTTATTCCATTCGGTTCGGGTCGAAGATCTTGCCCCGGGATGCAATTGGGCATGTATGCATTAGACCTGGCTTTGGCCCATTTACTTCATTGCTTTACGTGGGAGTTACCTAATGGGATGAAGTCGAGTGAAATGGATATGAATGATGTTTTTGGACTCAGTGTTCCTAGAGCGAGTCGACTCGTTATTGTTCCAACTAAGCGTGTTGTGTGCCCTCTCTGA 615 0.4683 MFGGTESVAAAIEWAISELMRNPQDLKRVQEELATVVGLDRRVEESDIEKLTYLKCVVKETLRLHPPVPLLLHETAEDATIRGYFVPKGSRVMINVWAIGRDKDSWEDPEEFKPSRFLNSSAPNFKGSNFEFIPFGSGRRSCPGMQLGMYALDLALAHLLHCFTWELPNGMKSSEMDMNDVFGLSVPRASRLVIVPTKRVVCPL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2971g00001 204 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 135 144 IPR017972 GO:0005506|GO:0016705
Trme2971g00001 204 FunFam Predicted protein 1 194 - -
Trme2971g00001 204 Pfam Cytochrome P450 1 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 SUPERFAMILY Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS E-class P450 group I signature 132 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS E-class P450 group I signature 142 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS E-class P450 group I signature 95 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS P450 superfamily signature 56 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS P450 superfamily signature 3 20 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS P450 superfamily signature 133 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PRINTS P450 superfamily signature 142 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme2971g00001 204 PANTHER CYTOCHROME P450 84A1-RELATED 1 204 - -
Trme2971g00001 204 Gene3D Cytochrome P450 1 192 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2971g00001 Trme-Chr2971 1482 2096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2971g00001 1 204 Monolignol Biosynthesis Gene Families AT4G36220 75.980 5.84e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2971g00001 K09755 - gmx:100793538 338.576