Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2966g00001 ATGTTTGAATTGGGTCCAAGTATAGGATACCCTGAATTTGGTATCATAGGAACTGTTACTAATGTAGATTCAGAATTCTCCATTTCAGAACAGTTCGATGCGAAATGCAATGAAAGGAATAACCTTAGGCCGATTTCAACTGACAGTAACAGAAGCTCTCACCTTCCTTTGTATCCACAAGTTTCTCTTCTGAGCACTCATGATCAAGCTTCTGAAACATATATGTCATGTAACCCCCCTCAGAACATTACAGACTCAACAAATGTGGGCAAGTATCCACCCCCTTTAAAGCACAAGCGTCCTGTTGCTATTGCCAATGATGAAATCATTGAGGGTAGGAGGTTTATTGAAGCAAGTCAACTGATTCCTAGCAAGCCTACTCGAGATATTGCCTTTGACATGGAGGATTTGGCCATACCATGGAACGATCTTGTTTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGCCTATTGACTTCATATTACGTTTTCTTTCCTTTAGCTTGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAGGAATTCATGCGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACACAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAG 707 0.4003 MFELGPSIGYPEFGIIGTVTNVDSEFSISEQFDAKCNERNNLRPISTDSNRSSHLPLYPQVSLLSTHDQASETYMSCNPPQNITDSTNVGKYPPPLKHKRPVAIANDEIIEGRRFIEASQLIPSKPTRDIAFDMEDLAIPWNDLVLKEKIGSGSFGTVHRAEWNGSPIDFILRFLSFSLDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2966g00001 235 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 79 235 - -
Trme2966g00001 235 FunFam Serine/threonine-protein kinase isoform 1 134 235 - -
Trme2966g00001 235 Pfam Protein tyrosine and serine/threonine kinase 145 234 IPR001245 GO:0004672|GO:0006468
Trme2966g00001 235 Gene3D Phosphorylase Kinase; domain 1 137 235 - -
Trme2966g00001 235 ProSiteProfiles Protein kinase domain profile. 144 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme2966g00001 235 SUPERFAMILY Protein kinase-like (PK-like) 119 234 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2966g00001 Trme-Chr2966 131 2462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2966g00001 119 235 MAP Kinase Kinase Kinase AT5G03730 68.376 7.14e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme2966g00001 PK_Tyr_Ser-Thr 9.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2966g00001 K14510 - gmx:100800648 300.056