Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29665g00001 ATGGGTTCAACCGGAGGTGGTAGAAGAAAAGCTACTGACACTATTTCACCTCGTGACAGAGATGGTCATGGTACTCACACTGCCACAACCGCCGCTGGCTCCGCCGTAGCCAACGCTACTCTTCTCGGTTACGCTACTGGAACTGCACGTGGTATGGCTCCTCAGGCGCGCATCGCTGTTTACAAAGTCTGCTGGACAGACGGTTGCTTTGCTTCCGACATACTCGCCGGAATAGATCAAGCGATTCAAGACGGCGTTGATGTGTTATCGCTCTCCCTCGGTGGTTCATCTTCCACTCCTTACTACTTCGATACAGTCGCAATCGGAGCTTTTGCGGCGGTGGAGAGGGGGATATTCGTTTCGTGTTCGGCGGGGAATACCGGTCCTCGCAGCGGTTCCTTGTCGAATGTAGCTCCGTGGCTCATGACCGTTGGAGCAGGGACGCTGGATCGGGATTTTCCGGCTTACGCTATGCTCGGAAACGGAAAACGTTTCTCTGGCGTTTCGCTTTACAGTGGAGAAGGAATGGGAAATGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTCAACTCATCAAGTAGCATATGTATGCCCGGTTCGCTTGACCCACAAATCGTGCGCGGGAAAGTTGTTGTTTGTGATAGAGGTGTTAACTCACGTGTTGAGAAAGGCACGGTGGTGAGCGACGCCGGAGGAGTTGGGATGATTCTTGCTAACACGGCGGCGAGCGGTGAGGGATTGGTGGCTGATAGTCACTTGGTACCCGCCGTAGCGGTTGGAAAAACAGAGGGGGATGAGATCAAAGAGTATGCATCGTTGGATCGTAATCCAACGGCTGTCCTTAGTTTCGGTGGAACTGTTTTGAACGTGAAACCTTCGCCCGTGATAGCATCTTTCAGCTCTCGTGGGCCCAATGGTGTGACCCCACAGATTCTAAAACCGGATATTATTGGGCCTGGCGTAAACATCTTAGCGGGCTGGACCGGTGCTGTTGGGCCTTCTGGCTCACAAGACACTCGCAAAACCCAATTCAATATCATGTCTGGTAATATTATTTAA 1062 0.5179 MGSTGGGRRKATDTISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTDGCFASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTVAIGAFAAVERGIFVSCSAGNTGPRSGSLSNVAPWLMTVGAGTLDRDFPAYAMLGNGKRFSGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDPQIVRGKVVVCDRGVNSRVEKGTVVSDAGGVGMILANTAASGEGLVADSHLVPAVAVGKTEGDEIKEYASLDRNPTAVLSFGGTVLNVKPSPVIASFSSRGPNGVTPQILKPDIIGPGVNILAGWTGAVGPSGSQDTRKTQFNIMSGNII 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29665g00001 353 CDD PA_subtilisin_like 159 280 - -
Trme29665g00001 353 Gene3D - 150 289 - -
Trme29665g00001 353 SUPERFAMILY Subtilisin-like 16 350 IPR036852 GO:0004252|GO:0006508
Trme29665g00001 353 Gene3D Peptidase S8/S53 domain 3 351 IPR036852 GO:0004252|GO:0006508
Trme29665g00001 353 MobiDBLite consensus disorder prediction 1 29 - -
Trme29665g00001 353 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 350 IPR045051 -
Trme29665g00001 353 Pfam Subtilase family 10 350 IPR000209 GO:0006508|GO:0008236
Trme29665g00001 353 ProSiteProfiles Serine proteases, subtilase domain profile. 1 353 - -
Trme29665g00001 353 FunFam subtilisin-like protease SBT1.5 150 289 - -
Trme29665g00001 353 Pfam PA domain 205 268 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29665g00001 Trme-Chr29665 39 1100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29665g00001 3 350 Subtilisin-like Serine Gene Family AT2G05920 71.920 2.03e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29665g00001 - - gmx:100786523 562.762