Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29658g00001 ATGCTTGAGAAAGAAGTGAGGAGGAAAGATTTTTGGTTGCTTTCTACTGTCCAAAAGCTTTTAAGGGAATTCATTAAAAGACTCTCACACGAGGCAGATGGTCTCATATTTCAGGGTTGGGACGATCCTTATGTACCACGTACTCACGAAGGACTCTTAAAGTGGAAATACGCCAATTTAAACTCAGTTGACTTTCTGTTTGAGGTTGAAGGTGACCGGGAGCTACTTTTTGTGAATGAGCGGGGAAAGAAGAAACTCATGGATGGGAATAAGGTTGCTTTCAAAG 286 0.4161 MLEKEVRRKDFWLLSTVQKLLREFIKRLSHEADGLIFQGWDDPYVPRTHEGLLKWKYANLNSVDFLFEVEGDRELLFVNERGKKKLMDGNKVAFK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29658g00001 95 Pfam mRNA capping enzyme, catalytic domain 5 56 IPR001339 GO:0004484|GO:0005524|GO:0006370
Trme29658g00001 95 PANTHER MRNA-CAPPING ENZYME 5 91 - -
Trme29658g00001 95 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 5 57 - -
Trme29658g00001 95 Gene3D - 3 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29658g00001 Trme-Chr29658 97 1064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29658g00001 6 95 Protein tyrosine phosphatase (PTP) family AT3G09100 73.626 1.24e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29658g00001 K13917 - gmx:100806992 171.785