Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29596g00001 GTTGACTTGATTGATATGGCTGCAAAGCTTCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGATGTATGACAGGAATATTTCAACTGTTTGATCGTCATCAGATGCTCACGGCTCGCCGGATTAGTCAGAAGAGGCTTCCTTCTGGTAATTTGCACTACAATGATGGCAGCTTCGAAAGGGATTCTGATAGCGTACAGCATCAACAACAAATGGCAACTGTAAGAACCTTGTTTTGA 252 0.4206 VDLIDMAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQMLTARRISQKRLPSGNLHYNDGSFERDSDSVQHQQQMATVRTLF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29596g00001 83 PANTHER LONGIFOLIA PROTEIN 6 75 IPR033334 GO:0051513
Trme29596g00001 83 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29596g00001 Trme-Chr29596 296 1114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29596g00001 6 68 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 44.776 5.43e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29596g00001 - - gmx:100805643 115.931