Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme295329g00001 GCTGACAATGTGAGAGCAAGACTCCAGCGTTATGGAAGGACTGGAGCTCATTTGAGTAATATCTGTTCATCGGATGATTCATCTCTTCAAACGGGAAGGTCATTGCTTCAGGAGATATTTTCGCAAGGTTTCCCAATTGTTTATAGATGGGCTCCTAAGTTAAGCTAG 168 0.4286 ADNVRARLQRYGRTGAHLSNICSSDDSSLQTGRSLLQEIFSQGFPIVYRWAPKLS 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme295329g00001 55 Pfam GIY-YIG domain-containing protein 1 52 - -
Trme295329g00001 55 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 52 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme295329g00001 Trme-Chr295329 3 253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme295329g00001 1 52 HRT Transcription Factor Family AT5G56780 50.847 1.39e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme295329g00001 - - vra:106762033 72.4034