Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme294830g00001 ACTTATCTCAATCTTCCATCTGAGATTGTTCCAGCTACTTTGAAGAAGCAGGCTAAGCCAGTTGGAAGGCCATTCGGTGGTCCACCTGGTGATCGCCCTAGGGGCCCACCTAGATTTGAAGGTGAAAGGAGATTCGGCGGTGATCGTGATGGATACCGTGGAGGTCCAAGAGGACCTGGTGGTGAATTCGGAGGAGAGAAAGGTGGAGCACCAGCTGACTACAGACCTTCATTTGGG 237 0.5232 TYLNLPSEIVPATLKKQAKPVGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGEFGGEKGGAPADYRPSFG 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme294830g00001 79 PANTHER 40S RIBOSOMAL PROTEIN S10 1 78 IPR037447 -
Trme294830g00001 79 MobiDBLite consensus disorder prediction 13 79 - -
Trme294830g00001 79 MobiDBLite consensus disorder prediction 35 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme294830g00001 Trme-Chr294830 3 331 Singletons
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme294830g00001 1 76 Cytoplasmic Ribosomal Protein Gene Family AT5G41520 69.737 2.83e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme294830g00001 K02947 - csv:101212088 62.7734