LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme2947g00002	ATGACTCAAATTCCTGATCTATCAGGAGTTGAAAACTTAAAAGTGTTTACCGTTGATAAATGCCCTAAATTAGTAAGGTTTCATGAATCCATTGGATTTATGCCTAATCTGGTGTATTTAAGTGCTTCGGGGTGCAAAGAGCTCAAAAGTTTTGTGCCAAAAATGGATTTGTCCTCCCTTCAAGTGCTTTCGTTTAATTTCTGCAAAAAATTTGAACACTTCCCAGAAGTAATGGAAAAGATGGACAAGCCATTAAAGATTCACATGATTAATACTGCCATTAAGGAGTTTCCAAAGTCTATTGGTTACCTTACAGGGCTTGAGTATATAGACTTGTCAATCTGCAAAGGGCTCAAAGATCTGTCAAGTAGCTTTATATTGCTTCCAAAATTGATCACTTTAAAAATTGATGGATGCTCTAAACAAGTAACATCATTTCAAAGGTTTAAAGAACGACATGTAATGGCAAATGGCTATCCAAATTTAGAAACACTTCATTTTAGCGGGGCTTATCTATCAAATGAAGATGTTAATGCCATTATTGAAAATTTTCCAAAACTGAAAGACTTGAAAGTTATGCACAATGAGTTTGTAACCCTCCCAAATTGCATCAGAGGATCTTTGCACTTAAAAAGTCTTGATGTGAGCTTTTGCCTGAAACTTAAAGAGTTTCCAAAACTTCCTTCAAGTATTCAGAAAATAAATGCAAGATATTGTCGGTCCTTAACTTCAGAGGCATCAAGTGTTCTCTGGTCTATGGTTTCACTAGAGATCCAAAGAATAGAAATTGTGATGCCACTACCAAAAATCGAGATTCCAAAATGGTTTGACTATGCTTGCACTGAAGAAATTCCACTTTTATGGGCTCGTCAGAAGTTTTCGGTTGTTGCTTTAGCATTGGTGTTCCGGGAAGTAAAAAAGACAGACAATAAGCTTTTTGCATTGTGTGAGGCTATAAATTCACTGACTGGACTGAATGAGTGCAGCCATTGTAGCCTCCATTTGTTTATTGATGGTCGAGAAATTTGTGCCAAGGATTTTCGTTATTTCAATGTTGGGGCAAATCATGTGCTACTGTGTGATCTACGAGTTTTGTTTAGTGATGAAGAGTGGAAGGACCTTGATGCAAGTTTTGGAAATTAA	1143	0.364	MTQIPDLSGVENLKVFTVDKCPKLVRFHESIGFMPNLVYLSASGCKELKSFVPKMDLSSLQVLSFNFCKKFEHFPEVMEKMDKPLKIHMINTAIKEFPKSIGYLTGLEYIDLSICKGLKDLSSSFILLPKLITLKIDGCSKQVTSFQRFKERHVMANGYPNLETLHFSGAYLSNEDVNAIIENFPKLKDLKVMHNEFVTLPNCIRGSLHLKSLDVSFCLKLKEFPKLPSSIQKINARYCRSLTSEASSVLWSMVSLEIQRIEIVMPLPKIEIPKWFDYACTEEIPLLWARQKFSVVALALVFREVKKTDNKLFALCEAINSLTGLNECSHCSLHLFIDGREICAKDFRYFNVGANHVLLCDLRVLFSDEEWKDLDASFGN	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme2947g00002	380	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57	9	82	-	-
	Trme2947g00002	380	SUPERFAMILY	L domain-like	3	278	-	-
	Trme2947g00002	380	Gene3D	Ribonuclease Inhibitor	89	270	IPR032675	-
	Trme2947g00002	380	Gene3D	Ribonuclease Inhibitor	1	88	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme2947g00002	Trme-Chr2947	881	2124	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme2947g00002	1	151	WRKY Transcription Factor Family	AT4G12020	35.099	2.09e-15	76.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme2947g00002	-		-	cam:101493067	499.975