Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29441g00001 GTTAAAATTGCGATAATAGGTATTCTAGCAGCAGGTTTTGGACTTGATTTCTCGACAGCACAAGATGTTGTGTTTTTGGAGCTACCTCAGTGCCCAACAGTGATGCTTCAGGCTGAGGACAGAGCTCATCGACGGGGGCAAACAAATGCAGTTAACATATACATATTCTGTGCAAAGGATACTTCGGATGAATCGCATTGGAAATATTTGAACAAAAGTTTGCACCGTGTTTCATCTACAACGGATGGCAAATATGATGCGGTGAAAGAGATAGAGGTATCACTTAAATTTCATTAA 297 0.404 VKIAIIGILAAGFGLDFSTAQDVVFLELPQCPTVMLQAEDRAHRRGQTNAVNIYIFCAKDTSDESHWKYLNKSLHRVSSTTDGKYDAVKEIEVSLKFH 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29441g00001 98 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 92 IPR027417 -
Trme29441g00001 98 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 1 94 - -
Trme29441g00001 98 Gene3D - 1 97 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29441g00001 1 64 RAD5 or RAD16-like Gene Family AT1G11100 42.188 1.28e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29441g00001 K25861 - lja:Lj0g3v0322239.1 172.555