Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2942g00001 ATGGAGAGCGTAAAAATACCTTTCAATGGTATTGTAAACGATTTTAGGGGAAGAAGAGTGCACTATAAAGATGATTGGATTTCTGGAATCACTTCAGGAATAGGGATATTGGCACCAACTACGTATATTTTCTTTGCTTCGGCTTTACCTGTTATTGCTTTCGGCGCGCAACTCAGTAGGGACACAGATGGAAGTTTGAGCACTGTAGAAACATTGGCTTCTACAGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAGCCTCTGCTAGTACTTGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTGGGGAGAGAACTCTTTTTGGCTTGGGTAGGATGGGTTTGTGTATGGACTGCTCTGTTGCTATTTCTTCTAGCAATATTCAATGCTGCCGTTATCATCAATAGATTTACGAGGATTGCTGGTGAGCTTTTTGGCATGTTGATCACTGTCTTATTCATTCAACAGGCAATCAAGGGAATGGTAACTGAGTTTCAAGTTCCTAAAGAGAGTGATCCAACATTGGATAAGT 574 0.4059 MESVKIPFNGIVNDFRGRRVHYKDDWISGITSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGRELFLAWVGWVCVWTALLLFLLAIFNAAVIINRFTRIAGELFGMLITVLFIQQAIKGMVTEFQVPKESDPTLDK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2942g00001 191 Gene3D Helical hairpin bin 18 60 - -
Trme2942g00001 191 PANTHER ANION EXCHANGE PROTEIN 5 188 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme2942g00001 191 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2942g00001 Trme-Chr2942 1 1582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2942g00001 1 191 Antiporters AT1G74810 72.251 3.61e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2942g00001 K24194 - gmx:100811184 319.701