Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2941g00001 TATGGCAATATTTCAAAGACAGATAAGAGATTTAGCTCTTATGTTACCCGAGTACACGATTCTTTGTTGAAGAAAGTNTTGAAAGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTTATTAATGGATTTGCTGTGCTTGTTACCCAACAGCAGGCAGAGAGACTATCAAGGAGCAGTGAAGTGGCCAATGTGGTTTTGGATTTTTCTGTTAGAACTGCAACTACGCATACTCCACAGTTTTTAGGTCTTCCACAAGGAGCATGGTCTCAAAATGGTGGGTTTGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTGTTGACACGGGCATAGATCCAACACACCCTAGTTTTGGTGATAGTAAATCTGATCATCTGTATCCCATTCCTGCTCATTTTTCTGGTATCTGCGAGGTTACTCGTGATTTTCCATCTGGCTCTTGCAATAGGAAACTTGTTGGGGCACGTCATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATATGACTCAAGACTATGCTTCTCCCTTTGATGGCGATGGCCATGGCACGCATACCGCATCTGTTGCAGCAGGAAACCATGGGATTCCTGTGATTGTTGCTGGACATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGAGCACACATTGCTGTGTACAAGGCACTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCCGCAATTGACCAGGCAGCTCAGGATGGTGTCGACGTAATAAGTTTATCGATCACTCCAAATAGGCGCCCTCCTGGTGTTGCAACTTTCTTCAATCCTATAGACATGGCGTTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTAGTGCAAGCTGCTGGGAATACCGGACCGTCACCAATGAGCATGTCTTCCTTCAGTCCATGGATTCTTACTGTTGGTGCTGCCTCTCATGACCGGCTTTATAGTAACTCAATATCTCTCGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACGTAAGTTTGTTTCTCTGTTCATGGTTAATATCTAA 1044 0.4397 YGNISKTDKRFSSYVTRVHDSLLKKVLKGEKYLKLYSYHYLINGFAVLVTQQQAERLSRSSEVANVVLDFSVRTATTHTPQFLGLPQGAWSQNGGFETAGEGIVIGFVDTGIDPTHPSFGDSKSDHLYPIPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNMTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRAHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDVISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWILTVGAASHDRLYSNSISLGNNVTIPGVGLARKFVSLFMVNI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2941g00001 347 Gene3D - 315 336 - -
Trme2941g00001 347 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 105 116 IPR023827 -
Trme2941g00001 347 Gene3D Peptidase S8/S53 domain 102 314 IPR036852 GO:0004252|GO:0006508
Trme2941g00001 347 Pfam Subtilase family 100 323 IPR000209 GO:0006508|GO:0008236
Trme2941g00001 347 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 329 IPR045051 -
Trme2941g00001 347 CDD Peptidases_S8_3 75 333 IPR034197 -
Trme2941g00001 347 Pfam Peptidase inhibitor I9 12 75 IPR010259 -
Trme2941g00001 347 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Trme2941g00001 347 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Trme2941g00001 347 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 73 IPR037045 -
Trme2941g00001 347 ProSiteProfiles Serine proteases, subtilase domain profile. 80 347 - -
Trme2941g00001 347 SUPERFAMILY Subtilisin-like 75 341 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2941g00001 Trme-Chr2941 360 2476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2941g00001 15 338 Subtilisin-like Serine Gene Family AT4G20430 81.846 0.0 566