Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme292829g00001 ATGGGCCGTTCGTCTCCTAACGACAAGCTTTTGCTTGTGCAAGCATTGAGGAGGAAGGGGCATGTTGTGGCTGTAACAGGGGATGGAACAAATGATGCTCCCGCACTACATGAG 114 0.5175 MGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHE 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme292829g00001 38 PANTHER CATION TRANSPORTING ATPASE 1 38 - -
Trme292829g00001 38 SUPERFAMILY HAD-like 3 37 IPR036412 -
Trme292829g00001 38 Gene3D - 1 38 IPR023214 -
Trme292829g00001 38 Pfam haloacid dehalogenase-like hydrolase 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme292829g00001 Trme-Chr292829 180 293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme292829g00001 1 38 Primary Pumps ATPases AT5G57110 94.737 3.70e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme292829g00001 K01537 - ahf:112750285 79.3369