Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29272g00001 CCAGGCCAACACATTCCTGCCGTTAAGGTGGCTACTACAGTGTTAACAAGGTGCTGTAATGTGTTACAAAATAGTCCAGTCGTTGTAAAGTTGATTCCTGCTGTTGGCATTATCATTTTTGCAGTATGGGGTGTTGGTCCATTAATGTTTCAGACAAGGAAACTATTTTTTCAGAGGAGTGATAATAGCTGGAAAAAAAGTACCACTCATTACATAGTAACTTCATATCTTCGACCATTATTGTTATGGACTGGAGCCATACTTATTTGCAGAGCATTTGAGCCAGTAATTCTACCTACAGAAACTAGCCAGGCTGTTAAGGAACGACTTCTGAGTTTCGTTAAATCATTGTCGACTGTAGTGGCTTTTGCCTATTGTTTATCAAGGTGTGCCTATTTCCTTACCTCCAGAATATCTCTTGAAATTGTAGAATCATTTGGTCACTTAGTGGTACTCGACTACTCGTAG 468 0.3953 PGQHIPAVKVATTVLTRCCNVLQNSPVVVKLIPAVGIIIFAVWGVGPLMFQTRKLFFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRAFEPVILPTETSQAVKERLLSFVKSLSTVVAFAYCLSRCAYFLTSRISLEIVESFGHLVVLDYS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29272g00001 155 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 3 129 IPR045042 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29272g00001 6 128 Mechanosensitive Ion Channel Family AT5G10490 56.098 7.75e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29272g00001 K22047 - gmx:100789444 216.853