Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme292521g00001 ATGGCTGCCACTAATTTGGATGAGAAATGGAGGGAGAGAAGATTCAAGAGAATATTACCAAAGTTGTTGAAGGATATCAACGCGTTGAGCGCCCAATGTGGTGTTGAGGCCTGCGTAATTACCAAAGGCCCACGCGATACGAGGCCTACAATTTGGGCATCTCCTGCCATGACTGGAAAATTATTGGAAGCAAACAAAGAGGCTGAAGTGGATCATCTGTTGAGGGAGAAAAAGAGATTGGAAGATAAATCTGTCAAGCTCAAACAATTACAAGAGCTTGATGAGAAGTTGAAGGAGAAAAAGAGATAG 309 0.4304 MAATNLDEKWRERRFKRILPKLLKDINALSAQCGVEACVITKGPRDTRPTIWASPAMTGKLLEANKEAEVDHLLREKKRLEDKSVKLKQLQELDEKLKEKKR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme292521g00001 102 Coils Coil 63 100 - -
Trme292521g00001 102 SUPERFAMILY SRF-like 7 66 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme292521g00001 Trme-Chr292521 21 329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme292521g00001 7 63 Type I MADS-box Gene Family AT3G05860 31.579 4.80e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme292521g00001 - - tcc:18600640 52.373