Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme292305g00001 AATGTGATCGTTTCAAATTCAGAGTTGGCAAAGGAGGTTTTAAAGGAGAAGGATCAACAGTTGGCTGACCGGCACAGAAGTCGGTCAGCCGCGAAGTTTAGCCGTGATGGGCAGGATTTAATTTGGGCTGATTATGGACCGCATTATGTGAAGGTAAGGAAAGTTTGTACTTTGGAGCTTTTTTCACCTAAGAGGATTGAGGCTTTGAGGCCTATTAGAGAAGATGAAGTTACTGCTATGGTTGAATCCATTTTCAATGATTCCACCAATTCTG 274 0.427 NVIVSNSELAKEVLKEKDQQLADRHRSRSAAKFSRDGQDLIWADYGPHYVKVRKVCTLELFSPKRIEALRPIREDEVTAMVESIFNDSTNS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme292305g00001 91 Pfam Cytochrome P450 2 84 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme292305g00001 91 SUPERFAMILY Cytochrome P450 2 86 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme292305g00001 91 Gene3D Cytochrome P450 1 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme292305g00001 91 PANTHER CYTOCHROME P450 98A9 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme292305g00001 Trme-Chr292305 78 351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme292305g00001 1 87 Monolignol Biosynthesis Gene Families AT2G40890 82.759 4.34e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme292305g00001 K09754 - jre:109008126 176.792