Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29219g00001 ATGGGTAACGGCACGTCTCGTGTTGTTGGCTGTTTAGCGCCATTCAATGGCAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGCCATTCCTTTTGTTATGTTAGACCGANNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAGAGGTTTACGGTTGATTCAAGTACTCTTGATTCTGAAACCTTGAGTGGTTCCTTTAGGCATGATAGCATGGAGCATTCTAATTCTTATGGTTTGCATAAGCAGGGTAAGACTTTCCCTGAAACGACGTTCAAAACGATTTCGGGGGCTTCTGTTAGTGCTAATGTTTCCACAGCAAGGACTGGTGGTACCCAGAGTGCATTGTTTGCTGGTGATTTCTTGGAACCTGCTGCATCGTTTGAGGGAACTGCTTCATTTGCTGCGATTCCTTTGCAGCCNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCCGTTGGATAGAAGCGGTGGTTTCATGTCTGGGCCAATAGAGAAAGGAGTTATGTCAGGTCCTCTTGATGATACTGATAAATCCAACTTTTCAGCTCCGCTTGCGCGTGGTCGCCGGAGACCACGTCTACAAAATCTCATGAGAAGTGTTAGTGGACCAATGAAGAACACCTTTTCTCGAACGTTCTCTAAGCATTCCGTGGGTGGAAGTTGGATGCAAAGGTTGTTCGTTCAACCGGTTACTCAATTGGCATGGCATTCCAGAGACGCAAAGTGTAGACCGGAAGTCTCTAGGAACTGTGGTATTGATGTTGGACCATATGAAACTGAGTATAAACACACACATAATTTGCAGTGGGCTCAGGGAAAGGCTGGTGAGGATAGGGTTCACGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCTCCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATCCACTTAAACCTGAAGTCCCTGAAACTGTAAAA 1092 0.3965 MGNGTSRVVGCLAPFNGKNGVDLEFLEPLDEGLGHSFCYVRPXXXXXXXXXXXXXERFTVDSSTLDSETLSGSFRHDSMEHSNSYGLHKQGKTFPETTFKTISGASVSANVSTARTGGTQSALFAGDFLEPAASFEGTASFAAIPLQPXXXXXXXXXXXXXXXXXXXXXXXPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQNLMRSVSGPMKNTFSRTFSKHSVGGSWMQRLFVQPVTQLAWHSRDAKCRPEVSRNCGIDVGPYETEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDPLKPEVPETVK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29219g00001 364 Gene3D - 266 359 IPR036457 -
Trme29219g00001 364 SUPERFAMILY PP2C-like 293 354 IPR036457 -
Trme29219g00001 364 MobiDBLite consensus disorder prediction 166 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29219g00001 Trme-Chr29219 1 1092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29219g00001 1 354 PP2C-type Phosphatase Gene Family AT2G46920 61.389 3.74e-139 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29219g00001 - - pcin:129315875 539.65