Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme29185g00001 GTGGAAACAGTGGCTCAATTTGGCGTAATATTTATTCTCTTTGCATTGGGCCTCGAGTTTTCCATGACAAAGCTTCGAGTTGTTCGATCTGTTGCTGTTCTTGGAGGCTTACTTCAAATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAATAATACTAATGCCCTTCATGGCCAAGTCACAATTGGGACCCTTATTTTACAG 303 0.3927 VETVAQFGVIFILFALGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNNTNALHGQVTIGTLILQ 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme29185g00001 101 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 101 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trme29185g00001 101 Pfam Sodium/hydrogen exchanger family 1 101 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme29185g00001 101 Gene3D - 1 101 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme29185g00001 Trme-Chr29185 87 753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme29185g00001 1 101 Antiporters AT5G11800 86.139 4.46e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme29185g00001 K26735 - gmx:100811030 186.808