Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme291625g00001 GCTATTTTGAGTGAAGGCTTTAAGAATGTCCCGAACTTGGTGCTGCGAGATGTTACCCCATTATCACTTGGTATCGAAGCAGATGTTGGTCTTGTTATGAGTGTTGTGATTCCTAGGAACACTCCTGTGCCTGTCAAGATGACAAAACCATTTCGTACCCTTATAGATAATCAGTCCATAGTCCGGCTTCCTGTTTACGAGGGTGAAAGAGCAAAAGCTAGTGACAATAATCTACTTGGTTCTTTTAACCTTCTTTGCCGTCCAGGTGCTCCTCGGGGCCAGCCCTTGGATGTATGCTTTGCCATTGATGAAAATGGTATCCTAACGGTTTCTGCTAAGGAAATATCTACA 351 0.4387 AILSEGFKNVPNLVLRDVTPLSLGIEADVGLVMSVVIPRNTPVPVKMTKPFRTLIDNQSIVRLPVYEGERAKASDNNLLGSFNLLCRPGAPRGQPLDVCFAIDENGILTVSAKEIST 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme291625g00001 117 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 5 117 IPR029047 -
Trme291625g00001 117 PANTHER HEAT SHOCK PROTEIN 70KDA 2 116 IPR013126 GO:0005524|GO:0140662
Trme291625g00001 117 Pfam Hsp70 protein 5 116 IPR013126 GO:0005524|GO:0140662
Trme291625g00001 117 PRINTS 70kDa heat shock protein signature 12 31 - -
Trme291625g00001 117 PRINTS 70kDa heat shock protein signature 93 109 - -
Trme291625g00001 117 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 9 117 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme291625g00001 Trme-Chr291625 2 352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme291625g00001 1 117 Calmodulin-binding Proteins AT3G12580 57.983 2.30e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme291625g00001 K03283 - tpra:123896225 145.976