Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme290720g00001 ATGCGGATAATCAACGAGCCTACTGCTGCTGCTCTTGCATATGGCCATGAGAGAATAAATGATTTTGGAAAACGAAATGGGTTTATCTTTGATCCTGGTGGTGGGACTTTTGACGTGTCTCTGCTTACACTTAAGGACGATAGCTTTGAAGTAAAGGCGACATCGGGAGATACACATCTTGGAGGAGAGGACTTTGATAACAGAATGGTGAACCATTTAGCGAAGGAGTTTAAGAGGAAGAATAAA 246 0.4228 MRIINEPTAAALAYGHERINDFGKRNGFIFDPGGGTFDVSLLTLKDDSFEVKATSGDTHLGGEDFDNRMVNHLAKEFKRKNK 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme290720g00001 82 Gene3D Actin; Chain A, domain 4 61 82 - -
Trme290720g00001 82 Gene3D - 20 60 - -
Trme290720g00001 82 SUPERFAMILY Actin-like ATPase domain 25 81 IPR043129 -
Trme290720g00001 82 Gene3D - 1 18 - -
Trme290720g00001 82 Pfam Hsp70 protein 1 81 IPR013126 GO:0005524|GO:0140662
Trme290720g00001 82 PANTHER HEAT SHOCK PROTEIN 70KDA 1 82 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme290720g00001 Trme-Chr290720 30 275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme290720g00001 1 82 Calmodulin-binding Proteins AT3G09440 72.289 9.10e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme290720g00001 K03283 - gmx:100804476 127.872