Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme290327g00001 ATGATGGAAGCAGTTGGTATTGAGGTACGCCACGACTTAGTTGGTGCTTTGGCTTGGGAGGCAGCCCAACGCATCCGGAATCCAATTACCGGTTCCCATGGAATGTATATTATGATGTCGGCACAAAATCAAGCCTTGAGGAATCATAACAGTCTTTTGACACAGGTGAACAGTGCATTGAAAAATGACAAAAACATTCTAGAAGTTCGAATTCAAGAGTTAGAGACAGAAGTTAATGACTTAAGGCAGCCTCCTGCACAGGAAACGCCAAATCATCAAGAGTAG 285 0.4351 MMEAVGIEVRHDLVGALAWEAAQRIRNPITGSHGMYIMMSAQNQALRNHNSLLTQVNSALKNDKNILEVRIQELETEVNDLRQPPAQETPNHQE 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme290327g00001 94 Pfam Lateral organ boundaries (LOB) domain 2 52 IPR004883 -
Trme290327g00001 94 Coils Coil 57 77 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trme290327g00001 LOB 1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme290327g00001 - K05467 nmk:CHR53_08685 35.4242