Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme289247g00001 ATGAAGAATTCTGGAAAAGAGATTGGATTGCCATTGAATCTTGACATTAAGAAGAAACTTTCTCTTCAATCTAATGCCTCCAAAGGTCCACCATCCCCCAAGCTACCTTTCTTCATTGGTGTTGCTGGTGGAACTGCATCTGGAAAAACAACTGTGTGCAACCTAATAAATACTCAGCTTCATGATCAACGTATTGTCCTCATTAATCAAGTAATTAATTCTCAATAA 228 0.3728 MKNSGKEIGLPLNLDIKKKLSLQSNASKGPPSPKLPFFIGVAGGTASGKTTVCNLINTQLHDQRIVLINQVINSQ 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme289247g00001 75 Gene3D - 5 70 IPR027417 -
Trme289247g00001 75 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme289247g00001 Trme-Chr289247 29 351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme289247g00001 30 70 PRT Gene Family AT5G40870 70.732 2.27e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme289247g00001 K00876 - pop:7461316 77.4109