Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28913g00001 CACCGTTGGATAGTTGACGTACGAGACTTGGTCGATGCAATACTGTTGGCATATGAGAATCATGAGGCAGAAGGGAGATACATATGCACTTCACACGCTGTCACGGAACGAGATTTGGTGGAGAAATTGAAGAGTATATATCCAAACTACAAGTACCCTACAAACTATACTGAGGTGAATGATTACAGAATGCTGAGCTCAAAGAAACTGCAAAGTTTAGGATGGAAATTCAGGCCATTGGAGGAAACACTCATTGATTCTGTTAAGAGCTATGGGGAGGCTGAACTACTTCAATCACAATAA 303 0.4158 HRWIVDVRDLVDAILLAYENHEAEGRYICTSHAVTERDLVEKLKSIYPNYKYPTNYTEVNDYRMLSSKKLQSLGWKFRPLEETLIDSVKSYGEAELLQSQ 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28913g00001 100 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 88 - -
Trme28913g00001 100 Gene3D - 1 100 - -
Trme28913g00001 100 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 92 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28913g00001 2 97 Monolignol Biosynthesis Gene Families AT2G33590 61.458 3.41e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28913g00001 - - tpra:123886337 160.614