Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28909g00001 GGTGTGACCCCTTGCATACAATTCTTGCGGTTAAATGCTGGCGATACTGTTACATTTAGTCGGATAGATCCCGGGGAAAAATTTGTACTTGGTTTTAGAAGAGCATCGGGTTCTACCGATACGCAGGATGACTCTACATCTGCTCATTCTAACGGGATTTCGACTAAGGATACAAATGTTTCTGGTGCAACTAAGAATCTGAACTCATTAAGTAGTTTTTCTGATCTTCTTCAATCAATGAAAGGTAACGGGGAACCTTACTTAAATGGACATTCAGAACATCTGCATTTGGGTAACGGAACTGCTGATTGGCTGAAAACTGCACATTGTGAGGAGGCGGTGAACAATGGTCCATTGCAGCGACTGGTTTCGGTTTCAGAAAAGAAAAAGACTTGCAAGATTGGGACGAAAACTAAGAGGTTGCACATTCATAGTGAAGATTCTTTGGAGTTAAGACTTACATGGGAAGAAGCACAAGACTTGCTTTGTCCGCCGCCTAATGTCAAGCCAAATATTGTACAAATCGAGGATCAAGTATTCGAAGAATATGATGTAAGTGAGAAACTGTGA 570 0.414 GVTPCIQFLRLNAGDTVTFSRIDPGEKFVLGFRRASGSTDTQDDSTSAHSNGISTKDTNVSGATKNLNSLSSFSDLLQSMKGNGEPYLNGHSEHLHLGNGTADWLKTAHCEEAVNNGPLQRLVSVSEKKKTCKIGTKTKRLHIHSEDSLELRLTWEEAQDLLCPPPNVKPNIVQIEDQVFEEYDVSEKL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28909g00001 189 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 184 - -
Trme28909g00001 189 Gene3D - 1 39 IPR015300 -
Trme28909g00001 189 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28909g00001 Trme-Chr28909 64 824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28909g00001 1 184 B3 DNA Binding Superfamily AT4G32010 40.761 3.94e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28909g00001 K09287 - psat:127118438 282.337