Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28890g00001 ATGACTTCCACATCAAAGATGGAGATAGTGTCAGAAGTTCCTAACTTCATTCGTGTCTACAACGATGGAACCATAGAACGTGTTGAAAAATTACCTTATGGTGTTAAAATATTTGGTGCTTATATGAACCATCCATTTTTTTGGGGTTCAAAACCAATTGGGTTTGAAAAAGTTGAGAAATTTCAGAAAACAAGTGAATTTTCTAATTTGTTATGGGAATTTGTGTACCCTTGTGCTCCTTTTGGGATAGATAATCCAAATGTGAATCCATTGGGACCAATGGCACCTAATTTGAGTACACTTGGTTGTTCTAAAATGCTTGTTACTATTGCTAGCAATGATCGTTTTAGGGACAGAACAGTTTTATATTATGAAGCTGTGAAAGAGAGTGAATGGAAAGGGGAAGTGGAATTGTTTGAAGAAGATGAAGAACATGTTTATTATATGTTCCACCCTGAATCTGATAAGGGCAAGAAACTCATCAAAGTTGTGGCTGATTTTCTTCACCAGTGA 513 0.3587 MTSTSKMEIVSEVPNFIRVYNDGTIERVEKLPYGVKIFGAYMNHPFFWGSKPIGFEKVEKFQKTSEFSNLLWEFVYPCAPFGIDNPNVNPLGPMAPNLSTLGCSKMLVTIASNDRFRDRTVLYYEAVKESEWKGEVELFEEDEEHVYYMFHPESDKGKKLIKVVADFLHQ 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28890g00001 170 Gene3D alpha/beta hydrolase 22 170 IPR029058 -
Trme28890g00001 170 PANTHER ARYLACETAMIDE DEACETYLASE 35 151 - -
Trme28890g00001 170 SUPERFAMILY alpha/beta-Hydrolases 33 169 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28890g00001 Trme-Chr28890 17 1006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28890g00001 29 170 Carbohydrate Esterase AT1G19190 30.556 1.65e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28890g00001 - - gmx:100814777 183.726