Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme288043g00001 TTAAGAGCACTGGAAGAGTTGTATAGAAGAGGAACAAGAACACCATCTGCTGAACAAATCCAACAGATCACTGCACAGCTTAGAAGGTTTGGAAAAATTGAAGGCAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAGAAACGACGCCGTCAAATGGAATCAGCTGCTGATCATCAGTTTGATGCTACTCTTGAAAAGAAAGACTTATTAG 226 0.3982 LRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAADHQFDATLEKKDLL 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme288043g00001 75 Gene3D - 1 62 - -
Trme288043g00001 75 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 65 IPR044555 GO:0003700|GO:0099402
Trme288043g00001 75 Pfam Homeodomain 1 51 IPR001356 GO:0003677
Trme288043g00001 75 ProSiteProfiles 'Homeobox' domain profile. 1 52 IPR001356 GO:0003677
Trme288043g00001 75 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Trme288043g00001 75 MobiDBLite consensus disorder prediction 53 75 - -
Trme288043g00001 75 MobiDBLite consensus disorder prediction 50 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme288043g00001 1 60 Wox Gene Family AT3G18010 88.333 1.19e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trme288043g00001 Homeodomain 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme288043g00001 - - vvo:131608217 138.272