Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28778g00001 ATGAGATCTAATACCAAGGCTCGTGCAATGGAACATTTTGATCCTGAGAAATACGTAGAGGCTTCTTTACCAGTCCGGGTTAATGAACAAAGACTGTCCAACTTATTGCAGTCCCTCCTGGTTGGTTTATCAATAGTAGGCATCTCCGTTATCAAAAAGATTCCAACTTCACTTTTATGGGGATATTTTGCGTACATGGCAATTGATAGTCTTCCAGGGAACCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCGCCCCAAGCCGCCGTTACAAGTAA 279 0.4301 MRSNTKARAMEHFDPEKYVEASLPVRVNEQRLSNLLQSLLVGLSIVGISVIKKIPTSLLWGYFAYMAIDSLPGNQFWERILLLFIAPSRRYK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28778g00001 92 PANTHER ANION EXCHANGE PROTEIN 10 91 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme28778g00001 92 Pfam HCO3- transporter family 25 86 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28778g00001 Trme-Chr28778 65 343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28778g00001 1 92 Antiporters AT5G25430 67.391 4.91e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28778g00001 K24194 - gmx:100792745 140.584