Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28662g00001 ATGAAGGAATTTGTCCTACATTTGTTGGTGCTGTCACATGTATATGTGGTCCCTCACTTGAAGCGTGAATGCGAACAGAAGCTAGAAATGGGGTTACTCACCATAGATAATGTAGTTGATGTATTTCAACTTGCATTATTGTGTGATGCTCCGCGGCTCAGTCTCATTTGTCACCGTATGATAATAAAAAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAAGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAATCAATGATTGAAGAAGAAAATAGTAAGAAGGAGAGGATCAGAAAAATGAATGAAAGACAGGTCTATCTGCAACTATACGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCGCATGATAAAGACTTTACAGCAAACCAACCGTGTAAGTATTCATCCTGCAAAGGGCTAGAATTGCTTGTTCGACATTTTGCTGGTTGCAAGTTGAGAGTCCCTGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTGTTGGAGCTGCATTCTCGTCTGTGTGCTGATCCGAATGTCTGTGGAGTTCCTTTGTGCAG 602 0.4236 MKEFVLHLLVLSHVYVVPHLKRECEQKLEMGLLTIDNVVDVFQLALLCDAPRLSLICHRMIIKNFKTVSESEGWKAMKQSHPVLEKEVLESMIEEENSKKERIRKMNERQVYLQLYDAMEALVHICRDGCRTIGPHDKDFTANQPCKYSSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPNVCGVPLC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28662g00001 200 Coils Coil 86 109 - -
Trme28662g00001 200 SMART TAZ_2 109 200 IPR000197 -
Trme28662g00001 200 SUPERFAMILY TAZ domain 107 200 IPR035898 -
Trme28662g00001 200 Gene3D TAZ domain 108 200 IPR035898 -
Trme28662g00001 200 ProSiteProfiles Zinc finger TAZ-type profile. 106 200 IPR000197 -
Trme28662g00001 200 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 200 IPR044513 -
Trme28662g00001 200 FunFam BTB/POZ and TAZ domain-containing protein 2 106 200 - -
Trme28662g00001 200 FunFam BTB/POZ and TAZ domain-containing protein 2 34 104 - -
Trme28662g00001 200 Pfam TAZ zinc finger 117 200 IPR000197 -
Trme28662g00001 200 Gene3D - 33 107 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Trme28662g00001 zf-TAZ 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28662g00001 - - lja:Lj2g3v1968190.1 367.466