Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme286323g00001 GCTGTGGTGCAGACAGAGGCAAGAGTTTGCGAGTCACAGAGCCATGGATACAAAGGTCCATGTTCTGGTGACCACAACTGTGCACTTGTTTGCAGGAATGAAGGTTTCTCTGGTGGCAGATGCAGAGGATTTCGCCATCGTTGCTTTTGCACCAAGCTTTGTTAA 165 0.4909 AVVQTEARVCESQSHGYKGPCSGDHNCALVCRNEGFSGGRCRGFRHRCFCTKLC 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme286323g00001 54 Pfam Gamma-thionin family 8 54 - -
Trme286323g00001 54 PRINTS Purothionin signature 39 53 IPR008176 GO:0006952
Trme286323g00001 54 PRINTS Purothionin signature 9 24 IPR008176 GO:0006952
Trme286323g00001 54 PANTHER DEFENSIN-LIKE PROTEIN 1 5 54 - -
Trme286323g00001 54 SUPERFAMILY Scorpion toxin-like 8 54 IPR036574 -
Trme286323g00001 54 CDD Knot1 19 51 IPR003614 GO:0006952
Trme286323g00001 54 Gene3D - 2 54 IPR036574 -
Trme286323g00001 54 ProSitePatterns Gamma-thionins family signature. 8 31 IPR008176 GO:0006952
Trme286323g00001 54 SMART gth_4 9 54 IPR003614 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme286323g00001 3 54 Plant Defensins Gene Families AT2G02130 67.308 3.24e-21 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme286323g00001 - - tpra:123917912 108.997