Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme285824g00001 ATGACTGGGGCCCCAGGGTCAGTTGTTACGTCAGTCGGGGGCATGCAATCCACTGGTCAACCTGCTGGAGCTCAGCTGGGTCAGCATCAGCTTGCTTATCAACATATTCATCAGCAGCAACAACAGCAACTTCAGCAACAACTGCAAGCCTTTTGGGCAAATCAGTATCAAGAAATCGAAAAGGTTACTGATTTCAAGAACCACAGCCTTCCCCTGGCAAGGATCAAAAAGATCATGAAGGCTGACGAGGATGTTAGAATGATATCTGCTGAGGCACCAGTCATATTTGCAAGGGCCT 298 0.4832 MTGAPGSVVTSVGGMQSTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme285824g00001 99 Gene3D Histone, subunit A 30 99 IPR009072 GO:0046982
Trme285824g00001 99 MobiDBLite consensus disorder prediction 1 23 - -
Trme285824g00001 99 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 34 99 - -
Trme285824g00001 99 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 69 98 IPR003958 -
Trme285824g00001 99 SUPERFAMILY Histone-fold 38 99 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme285824g00001 Trme-Chr285824 12 309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme285824g00001 30 99 CCAAT-HAP5 Transcription Factor Family AT1G08970 78.873 5.95e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme285824g00001 K08066 - gmx:100782754 139.813