Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme285640g00001 ATGAATCCTATTTGGATTCATTCTAGATCTACTGGTAAGCCTTATTATGGAATTTTACATCGGATTGATGTTGGTGTTGTTATTGATTTGGAGCCTGCTAGATCTGAGGATCCAGCGCTTTCGATTGCTGGTGCTGTTCAGTCTCAGAAGCTTGCTGTGAGAGCGATTTCGCAGCTTCAATCGCTTCCTGGTGGTGATGTTAAGGTTTTATGTGATGCTGTTGTTGAGAGTGTTAGAGAATTGACTG 247 0.4211 MNPIWIHSRSTGKPYYGILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELT 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme285640g00001 82 Gene3D PAS domain 1 62 - -
Trme285640g00001 82 Pfam PAS fold 1 33 IPR013654 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme285640g00001 Trme-Chr285640 8 254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme285640g00001 1 82 Histidine Kinase Gene Family AT2G18790 85.366 6.43e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme285640g00001 K12121 - gmx:100794865 154.836